euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

217 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip81 chr1 17229468 17229468 - unknown germline . no 260 .
srip4022 chr1 149216670 149216670 . unknown germline . no 260 .
srip4170 chr1 152443884 152443884 - unknown germline . no 260 .
srip5216 chr1 174057875 174057875 - unknown germline . no 260 .
srip6242 chr1 194934645 194934645 - unknown germline . no 260 .
srip6403 chr1 211569127 211569127 - unknown germline . no 260 LINC00467
srip6405 chr1 213311156 213311156 - unknown germline . no 260 RPS6KC1
srip6851 chr1 221827812 221827812 - unknown germline . no 260 .
srip6951 chr1 222779048 222779048 - unknown germline . no 260 .
srip7226 chr1 238131335 238131335 . unknown germline . no 260 .
srip7464 chr1 249161344 249161344 . unknown germline . no 260 .
srip8464 chr10 25707693 25707693 - unknown germline . no 260 GPR158
srip8766 chr10 35459500 35459500 - unknown germline . no 260 CREM
srip9542 chr10 68803690 68803690 + unknown germline . no 260 LRRTM3;CTNNA3
srip9819 chr10 82972200 82972200 . unknown germline . no 260 .
srip10585 chr10 91717638 91717638 - unknown germline . no 260 .
srip10707 chr10 103580519 103580519 . unknown germline . no 260 LOC100289509
srip12327 chr11 10897407 10897407 - unknown germline . no 260 LOC729013
srip12328 chr11 11280142 11280142 - unknown germline . no 260 .
srip12560 chr11 15380252 15380252 . unknown germline . no 260 .
srip12803 chr11 25123346 25123346 - unknown germline . no 260 .
srip13803 chr11 33670128 33670128 + unknown germline . no 260 C11orf41
srip14253 chr11 41831803 41831803 - unknown germline . no 260 .
srip14774 chr11 48360754 48360754 - unknown germline . no 260 .
srip15003 chr11 50399973 50399973 - unknown germline . no 260 .
srip16164 chr11 77499199 77499199 + unknown germline . no 260 RSF1
srip17193 chr11 94684368 94684368 + unknown germline . no 260 .
srip17322 chr11 97434306 97434306 - unknown germline . no 260 .
srip18326 chr11 119329509 119329509 . unknown germline . no 260 LOC100499227
srip18339 chr11 121131527 121131527 - unknown germline . no 260 .
srip19275 chr11 134305645 134305645 - unknown germline . no 260 .
srip19884 chr12 11219195 11219195 - unknown germline . no 260 PRH1-PRR4
srip20145 chr12 12933687 12933687 - unknown germline . no 260 APOLD1
srip20755 chr12 28226420 28226420 - unknown germline . no 260 .
srip21329 chr12 34281886 34281886 + unknown germline . no 260 .
srip21546 chr12 34348589 34348589 . unknown germline . no 260 .
srip21747 chr12 38108992 38108992 . unknown germline . no 260 .
srip21749 chr12 38115189 38115189 . unknown germline . no 260 .
srip22218 chr12 43256979 43256979 - unknown germline . no 260 .
srip22867 chr12 50663853 50663853 . unknown germline . no 260 LIMA1
srip23439 chr12 70302868 70302868 - unknown germline . no 260 LOC100652962
srip23517 chr12 71053976 71053976 + unknown germline . no 260 PTPRR
srip23695 chr12 77631318 77631318 . unknown germline . no 260 .
srip24637 chr12 84965140 84965140 + unknown germline . no 260 .
srip24896 chr12 85506283 85506283 + unknown germline . no 260 LRRIQ1
srip25150 chr12 96500673 96500673 . unknown germline . no 260 .
srip26074 chr12 118186932 118186932 + unknown germline . no 260 KSR2
srip26367 chr12 126802932 126802932 - unknown germline . no 260 .
srip27501 chr13 29957391 29957391 . unknown germline . no 260 MTUS2
srip28006 chr13 42771398 42771398 + unknown germline . no 260 DGKH
srip29654 chr13 61734491 61734491 . unknown germline . no 260 .
srip30959 chr13 79259790 79259790 - unknown germline . no 260 .
srip31168 chr13 80219330 80219330 - unknown germline . no 260 .
srip33551 chr13 104296230 104296230 - unknown germline . no 260 .
srip35336 chr14 30525250 30525250 . unknown germline . no 260 .
srip35513 chr14 32195987 32195987 + unknown germline . no 260 NUBPL
srip35857 chr14 36674752 36674752 + unknown germline . no 260 .
srip37632 chr14 63233742 63233742 - unknown germline . no 260 KCNH5
srip38954 chr14 107128445 107128445 . unknown germline . no 260 IGH@
srip39338 chr15 28175797 28175797 - unknown germline . no 260 OCA2
srip42524 chr15 83551628 83551628 - unknown germline . no 260 HOMER2
srip42608 chr15 85140901 85140901 + unknown germline . no 260 .
srip43242 chr15 100931152 100931152 - unknown germline . no 260 .
srip45518 chr16 33992437 33992437 . unknown germline . no 260 .
srip46339 chr16 71028016 71028016 + unknown germline . no 260 HYDIN
srip46363 chr16 72522723 72522723 + unknown germline . no 260 .
srip46488 chr17 1291410 1291410 - unknown germline . no 260 YWHAE
srip46527 chr17 4959198 4959198 . unknown germline . no 260 .
srip47216 chr17 28398310 28398310 + unknown germline . no 260 EFCAB5
srip47707 chr17 32813627 32813627 + unknown germline . no 260 .
srip47890 chr17 34272157 34272157 + unknown germline . no 260 .
srip47962 chr17 57159326 57159326 + unknown germline . no 260 TRIM37
srip48365 chr17 68357404 68357404 + unknown germline . no 260 .
srip48478 chr17 69159663 69159663 . unknown germline . no 260 .
srip48981 chr18 15095255 15095255 - unknown germline . no 260 .
srip49031 chr18 22349995 22349995 . unknown germline . no 260 .
srip49063 chr18 24380405 24380405 . unknown germline . no 260 .
srip49447 chr18 28732910 28732910 - unknown germline . no 260 DSC1
srip49799 chr18 42368766 42368766 . unknown germline . no 260 SETBP1
srip50365 chr18 51425734 51425734 - unknown germline . no 260 .
srip50393 chr18 51488332 51488332 - unknown germline . no 260 .
srip50744 chr18 51762737 51762737 - unknown germline . no 260 .
srip50985 chr18 59579968 59579968 + unknown germline . no 260 .
srip52529 chr19 55509974 55509974 - unknown germline . no 260 NLRP2
srip52865 chr2 12791343 12791343 . unknown germline . no 260 .
srip53160 chr2 22706330 22706330 . unknown germline . no 260 .
srip53485 chr2 23191009 23191009 - unknown germline . no 260 .
srip53928 chr2 35879348 35879348 + unknown germline . no 260 .
srip54105 chr2 36381245 36381245 + unknown germline . no 260 .
srip54271 chr2 36570259 36570259 - unknown germline . no 260 .
srip55188 chr2 66635881 66635881 - unknown germline . no 260 .
srip56225 chr2 82098035 82098035 + unknown germline . no 260 .
srip56523 chr2 83188332 83188332 + unknown germline . no 260 .
srip57857 chr2 133034585 133034585 . unknown germline . no 260 .
srip58249 chr2 141852915 141852915 - unknown germline . no 260 LRP1B
srip59198 chr2 147020925 147020925 + unknown germline . no 260 .
srip59771 chr2 168735521 168735521 - unknown germline . no 260 .
srip60709 chr2 189673405 189673405 . unknown germline . no 260 .
srip60783 chr2 191478707 191478707 - unknown germline . no 260 .
srip62124 chr2 221503759 221503759 - unknown germline . no 260 .
srip62667 chr2 238252167 238252167 + unknown germline . no 260 COL6A3
srip63457 chr20 16479499 16479499 - unknown germline . no 260 KIF16B
srip64047 chr20 25895497 25895497 - unknown germline . no 260 .
srip64055 chr20 25903871 25903871 - unknown germline . no 260 .
srip65333 chr20 60132824 60132824 - unknown germline . no 260 CDH4
srip67502 chr22 22486374 22486374 - unknown germline . no 260 IGL@
srip67837 chr22 22715593 22715593 + unknown germline . no 260 IGL@
srip70459 chr3 20748900 20748900 - unknown germline . no 260 .
srip70740 chr3 24987867 24987867 - unknown germline . no 260 .
srip71088 chr3 26524455 26524455 - unknown germline . no 260 .
srip71332 chr3 31686283 31686283 - unknown germline . no 260 .
srip72722 chr3 55788574 55788574 + unknown germline . no 260 ERC2
srip73387 chr3 59852896 59852896 + unknown germline . no 260 FHIT
srip74856 chr3 82144860 82144860 - unknown germline . no 260 .
srip76603 chr3 109751763 109751763 + unknown germline . no 260 .
srip76687 chr3 109850136 109850136 + unknown germline . no 260 .
srip77231 chr3 123590717 123590717 + unknown germline . no 260 MYLK
srip78315 chr3 146609902 146609902 . unknown germline . no 260 .
srip80361 chr3 176091325 176091325 + unknown germline . no 260 .
srip80863 chr3 181192836 181192836 + unknown germline . no 260 .
srip81484 chr3 186372132 186372132 + unknown germline . no 260 .
srip82125 chr3 193354172 193354172 - unknown germline . no 260 OPA1
srip82230 chr3 194455319 194455319 . unknown germline . no 260 LOC100507391
srip82251 chr4 5041304 5041304 . unknown germline . no 260 .
srip82319 chr4 7874660 7874660 . unknown germline . no 260 AFAP1
srip82349 chr4 8061649 8061649 . unknown germline . no 260 ABLIM2
srip82989 chr4 18162684 18162684 - unknown germline . no 260 .
srip83570 chr4 26187820 26187820 + unknown germline . no 260 .
srip83851 chr4 29321856 29321856 + unknown germline . no 260 .
srip83936 chr4 31036877 31036877 . unknown germline . no 260 PCDH7
srip84685 chr4 47007785 47007785 - unknown germline . no 260 .
srip84911 chr4 47189138 47189138 + unknown germline . no 260 GABRB1
srip84964 chr4 48673889 48673889 + unknown germline . no 260 FRYL
srip85928 chr4 59622444 59622444 + unknown germline . no 260 .
srip86169 chr4 66413931 66413931 + unknown germline . no 260 EPHA5
srip86339 chr4 66809073 66809073 - unknown germline . no 260 .
srip87676 chr4 82515382 82515382 . unknown germline . no 260 .
srip88377 chr4 101264124 101264124 + unknown germline . no 260 .
srip89613 chr4 110248324 110248324 - unknown germline . no 260 .
srip90354 chr4 115132699 115132699 + unknown germline . no 260 .
srip90709 chr4 118765257 118765257 + unknown germline . no 260 .
srip91600 chr4 132181655 132181655 - unknown germline . no 260 .
srip92205 chr4 134596423 134596423 + unknown germline . no 260 .
srip93885 chr4 158907280 158907280 - unknown germline . no 260 .
srip93969 chr4 164673061 164673061 + unknown germline . no 260 MARCH1
srip94643 chr4 174035605 174035605 + unknown germline . no 260 .
srip95441 chr4 190969642 190969642 + unknown germline . no 260 .
srip96084 chr5 8749521 8749521 + unknown germline . no 260 .
srip96293 chr5 11391269 11391269 + unknown germline . no 260 CTNND2
srip97755 chr5 33633341 33633341 - unknown germline . no 260 ADAMTS12
srip99521 chr5 68263468 68263468 - unknown germline . no 260 .
srip100094 chr5 84463535 84463535 . unknown germline . no 260 .
srip100715 chr5 89450774 89450774 + unknown germline . no 260 .
srip100854 chr5 94828347 94828347 + unknown germline . no 260 TTC37
srip101090 chr5 96866415 96866415 + unknown germline . no 260 .
srip101685 chr5 105935368 105935368 + unknown germline . no 260 .
srip103349 chr5 125040043 125040043 + unknown germline . no 260 .
srip103782 chr5 137014782 137014782 - unknown germline . no 260 KLHL3
srip104826 chr5 154873923 154873923 - unknown germline . no 260 .
srip105735 chr5 160435672 160435672 - unknown germline . no 260 .
srip105989 chr5 171921396 171921396 . unknown germline . no 260 .
srip107522 chr6 13503042 13503042 + unknown germline . no 260 .
srip108176 chr6 39219886 39219886 . unknown germline . no 260 .
srip108286 chr6 45852704 45852704 - unknown germline . no 260 .
srip109532 chr6 63368201 63368201 + unknown germline . no 260 .
srip111037 chr6 77980645 77980645 - unknown germline . no 260 .
srip111277 chr6 78749399 78749399 + unknown germline . no 260 .
srip111285 chr6 79662144 79662144 . unknown germline . no 260 PHIP
srip111292 chr6 80084904 80084904 . unknown germline . no 260 .
srip112720 chr6 102283765 102283765 - unknown germline . no 260 GRIK2
srip114761 chr6 148195798 148195798 + unknown germline . no 260 .
srip115704 chr6 162181268 162181268 + unknown germline . no 260 PARK2
srip116626 chr7 27307051 27307051 . unknown germline . no 260 .
srip116631 chr7 28009674 28009674 + unknown germline . no 260 JAZF1
srip116888 chr7 41310794 41310794 - unknown germline . no 260 .
srip117901 chr7 57768878 57768878 - unknown germline . no 260 LOC100287663
srip118303 chr7 62492938 62492938 + unknown germline . no 260 .
srip119646 chr7 84901717 84901717 - unknown germline . no 260 .
srip120250 chr7 85044744 85044744 + unknown germline . no 260 .
srip121088 chr7 105741884 105741884 . unknown germline . no 260 SYPL1
srip121172 chr7 107410634 107410634 - unknown germline . no 260 SLC26A3
srip121766 chr7 107829257 107829257 + unknown germline . no 260 NRCAM
srip122279 chr7 110484750 110484750 + unknown germline . no 260 IMMP2L
srip123107 chr7 130867411 130867411 - unknown germline . no 260 MKLN1
srip124075 chr8 4452901 4452901 - unknown germline . no 260 CSMD1
srip124387 chr8 5829282 5829282 - unknown germline . no 260 .
srip125436 chr8 24926547 24926547 - unknown germline . no 260 .
srip126344 chr8 57808533 57808533 . unknown germline . no 260 .
srip126885 chr8 67381884 67381884 - unknown germline . no 260 .
srip127453 chr8 72399228 72399228 - unknown germline . no 260 .
srip128267 chr8 87315042 87315042 + unknown germline . no 260 .
srip128318 chr8 89825401 89825401 . unknown germline . no 260 .
srip129124 chr8 115788559 115788559 - unknown germline . no 260 .
srip130131 chr8 131041227 131041227 + unknown germline . no 260 .
srip130481 chr8 144723592 144723592 - unknown germline . no 260 ZNF623
srip131079 chr9 6290487 6290487 + unknown germline . no 260 .
srip131375 chr9 7741401 7741401 + unknown germline . no 260 .
srip131548 chr9 9236605 9236605 + unknown germline . no 260 PTPRD
srip132856 chr9 32092741 32092741 - unknown germline . no 260 .
srip133388 chr9 32463889 32463889 - unknown germline . no 260 DDX58
srip133627 chr9 34904794 34904794 - unknown germline . no 260 .
srip133962 chr9 72777417 72777417 - unknown germline . no 260 LOC100507244;MAMDC2
srip135655 chr9 114616225 114616225 . unknown germline . no 260 .
srip135883 chr9 118083873 118083873 - unknown germline . no 260 DEC1
srip136281 chrX 4659603 4659603 - unknown germline . no 260 .
srip137257 chrX 54917144 54917144 + unknown germline . no 260 .
srip137351 chrX 55264659 55264659 - unknown germline . no 260 .
srip137578 chrX 55585154 55585154 - unknown germline . no 260 .
srip137618 chrX 57708583 57708583 - unknown germline . no 260 .
srip137786 chrX 58561106 58561106 . unknown germline . no 260 .
srip139451 chrX 85781790 85781790 + unknown germline . no 260 DACH2
srip139758 chrX 98264289 98264289 . unknown germline . no 260 .
srip140818 chrX 119892837 119892837 - unknown germline . no 260 .
srip141064 chrX 122664864 122664864 - unknown germline . no 260 .
srip142281 chrY 13490336 13490336 + unknown germline . no 260 .
srip142319 chrY 13834738 13834738 - unknown germline . no 260 .
srip142320 chrY 13855556 13855556 . unknown germline . no 260 .